Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 TSPY13P-201ENST00000338964 914 ntBASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 KRT18P24-201ENST00000344739 1156 ntBASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 THA1P-201ENST00000590384 1145 ntBASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV3A0A0B4J244 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 AC074183.2-201ENST00000623112 922 ntBASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV3A0A0B4J244 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV3A0A0B4J244 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV3A0A0B4J244 EP400NL-214ENST00000641289 2402 ntBASIC18.14■□□□□ 0.5
TRAV3A0A0B4J244 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV3A0A0B4J244 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV3A0A0B4J244 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV3A0A0B4J244 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV3A0A0B4J244 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms