Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 AC009831.1-201ENST00000580420 1582 ntBASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 AL137060.1-201ENST00000618151 2648 ntBASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 RNF126P1-201ENST00000567452 1320 ntBASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 HLA-L-211ENST00000482052 1765 ntBASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 AC018755.3-202ENST00000596210 929 ntBASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV25-1A0A075B6N4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV25-1A0A075B6N4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 DUSP8P3-201ENST00000399571 1760 ntBASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV25-1A0A075B6N4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRBV25-1A0A075B6N4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 GUSBP5-202ENST00000510805 1989 ntBASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV25-1A0A075B6N4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV25-1A0A075B6N4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV25-1A0A075B6N4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV25-1A0A075B6N4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV25-1A0A075B6N4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV25-1A0A075B6N4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms