Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 HILS1-202ENST00000545329 423 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 SORD2P-201ENST00000558556 1069 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC027237.1-201ENST00000560942 655 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC017083.2-201ENST00000608069 979 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC133552.6-201ENST00000613406 534 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 RN7SL832P-201ENST00000607781 1756 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 KRT8P24-201ENST00000560290 1559 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC073548.1-201ENST00000624088 1882 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC131902.2-201ENST00000566892 2172 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AC118758.2-201ENST00000614242 2813 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CICP12-201ENST00000455801 843 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 SNX29P1-201ENST00000548357 1007 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 MIR6805-201ENST00000615055 62 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AC130686.1-201ENST00000622936 2466 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 AC004899.2-201ENST00000622993 3860 ntBASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HLA-DRB4X5D2U9 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms