Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 TSPY25P-201ENST00000429463 745 ntBASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 OR2R1P-201ENST00000441404 914 ntBASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 NUP210P1-202ENST00000504322 710 ntBASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AL606495.2-201ENST00000605867 535 ntBASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AC021016.3-201ENST00000608367 477 ntBASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AL591471.1-201ENST00000621855 229 ntBASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF304Q9HCX3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 RN7SL720P-201ENST00000488178 304 ntBASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 AC106872.11-201ENST00000605838 421 ntBASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms