Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 RPS2P32-201ENST00000439199 892 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 PUDPP3-201ENST00000445368 636 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 AC068587.3-201ENST00000526613 355 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 AC132938.4-201ENST00000623835 848 ntBASIC13.17□□□□□ -0.3
SNX18Q96RF0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SNX18Q96RF0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNX18Q96RF0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 AC134312.5-201ENST00000568031 1313 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 FAM90A12P-201ENST00000519497 2375 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 FAM90A24P-201ENST00000520792 2369 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 HLA-V-201ENST00000429037 534 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 CROCCP4-201ENST00000457096 498 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 MIR5189-201ENST00000577370 114 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.16□□□□□ -0.3
SNX18Q96RF0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNX18Q96RF0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SNX18Q96RF0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms