Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC140912.1-201ENST00000577171 1054 ntBASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AL133338.1-201ENST00000565695 1517 ntBASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHAMP1Q96JM3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.64■□□□□ 0.26
CHAMP1Q96JM3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 AC009093.10-201ENST00000641956 1442 ntBASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 TPM3P8-201ENST00000330554 643 ntBASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 TMEM14DP-201ENST00000422205 345 ntBASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 SBF1P1-201ENST00000444527 5631 ntBASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 NFIC-211ENST00000641145 8399 ntBASIC16.64■□□□□ 0.25
CHAMP1Q96JM3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 VENTXP1-201ENST00000569334 2716 ntBASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 USP17L6P-201ENST00000382470 1197 ntBASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC16.63■□□□□ 0.25
CHAMP1Q96JM3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHAMP1Q96JM3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms