Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 FP325330.2-201ENST00000624219 5630 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC073869.1-201ENST00000415574 2762 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC012441.1-201ENST00000446669 685 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC068587.3-201ENST00000526613 355 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 RN7SL48P-201ENST00000579283 293 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 BAP1-211ENST00000615113 489 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 AC135782.3-201ENST00000562782 2105 ntBASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS33AQ96AX1 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AC009093.10-201ENST00000641956 1442 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 USP17L6P-201ENST00000382470 1197 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 BAATP1-201ENST00000412284 1225 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 PMS2P2-201ENST00000425039 1128 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AC092183.1-201ENST00000469884 875 ntBASIC13.84□□□□□ -0.19
VPS33AQ96AX1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS33AQ96AX1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms