Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 OR8S1-201ENST00000310194 1080 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 MIR663B-201ENST00000408361 115 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ATP5G2P4-201ENST00000442175 420 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 RNMTL1P1-201ENST00000454103 560 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 RPL13AP20-201ENST00000459725 609 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SCARNA21-201ENST00000517026 139 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AL096828.3-201ENST00000615354 462 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AL023803.2-201ENST00000620080 638 ntBASIC13.44□□□□□ -0.26
NUP43Q8NFH3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AHCYP4-201ENST00000419201 1315 ntBASIC13.43□□□□□ -0.26
NUP43Q8NFH3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 KRT18P36-201ENST00000411618 1276 ntBASIC13.43□□□□□ -0.26
NUP43Q8NFH3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 RPL18P13-201ENST00000478088 569 ntBASIC13.43□□□□□ -0.26
NUP43Q8NFH3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AC005324.6-201ENST00000587972 613 ntBASIC13.43□□□□□ -0.26
NUP43Q8NFH3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms