Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 MIR658-201ENST00000385210 100 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 KLF2P1-201ENST00000447438 1042 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 TMEM198B-204ENST00000484016 896 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 IGHV3-71-201ENST00000523324 359 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 AC124068.2-201ENST00000569473 1109 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 AC144522.1-201ENST00000625111 1658 ntBASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 MTX1P1-201ENST00000440904 838 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 HSPB1P2-201ENST00000448722 546 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 Z93015.1-201ENST00000451718 390 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 MIR4259-201ENST00000584466 101 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AP000346.4-201ENST00000614827 381 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AL023803.2-201ENST00000620080 638 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 AC133540.1-201ENST00000620845 1019 ntBASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms