Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC024681.1-201ENST00000521917 487 ntBASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AL161670.2-201ENST00000557650 1227 ntBASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC091812.3-201ENST00000621362 345 ntBASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC087386.2-201ENST00000623212 4637 ntBASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AL390755.1-201ENST00000623716 2027 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 MYADML-201ENST00000474610 2147 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AGGF1P1-201ENST00000509500 2073 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 ISCA2P1-201ENST00000425548 448 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 UPF3AP2-201ENST00000457924 1132 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 POU5F1P2-201ENST00000521750 823 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC124068.2-201ENST00000569473 1109 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 MIR3619-201ENST00000579667 83 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms