Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC092337.1-201ENST00000568699 1129 ntBASIC12.65□□□□□ -0.38
C11orf88Q6PI97 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 AC025048.3-201ENST00000590609 569 ntBASIC12.65□□□□□ -0.38
C11orf88Q6PI97 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 AC005702.4-201ENST00000618393 416 ntBASIC12.65□□□□□ -0.38
C11orf88Q6PI97 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 AC068760.1-201ENST00000493579 1953 ntBASIC12.65□□□□□ -0.38
C11orf88Q6PI97 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.65□□□□□ -0.38
C11orf88Q6PI97 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
C11orf88Q6PI97 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
C11orf88Q6PI97 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.65□□□□□ -0.39
C11orf88Q6PI97 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 Z97205.2-201ENST00000564697 1639 ntBASIC12.64□□□□□ -0.39
C11orf88Q6PI97 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 AC106886.1-201ENST00000568660 600 ntBASIC12.64□□□□□ -0.39
C11orf88Q6PI97 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 AL109936.8-201ENST00000641772 604 ntBASIC12.64□□□□□ -0.39
C11orf88Q6PI97 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms