Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 RN7SKP214-201ENST00000364208 315 ntBASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 XBP1P1-201ENST00000436573 652 ntBASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 TMEM198B-204ENST00000484016 896 ntBASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 AL139099.5-201ENST00000635274 300 ntBASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 NAP1L6-202ENST00000641404 1222 ntBASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC39BQ5VTQ0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 TUBBP5-203ENST00000508529 1334 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 MIR769-201ENST00000390225 118 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 KRT18P36-201ENST00000411618 1276 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 ST13P19-201ENST00000442505 1124 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 AC003686.1-201ENST00000550956 1034 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 AC091544.8-201ENST00000619490 361 ntBASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC39BQ5VTQ0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms