Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 RBP4-203ENST00000371469 814 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 CFL1P6-201ENST00000400899 494 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 SNORA50C-201ENST00000408535 133 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 SNRPD2P2-201ENST00000473818 333 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 DPY19L2P4-201ENST00000479881 442 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 AC106782.5-201ENST00000616011 337 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 SNORA50.1-201ENST00000628590 135 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 TCAM1P-207ENST00000485295 1537 ntBASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42BPAQ5VT25 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 HDGF-202ENST00000368206 960 ntTSL 5 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AC137723.2-201ENST00000623540 398 ntBASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AC040160.2-201ENST00000623816 1675 ntBASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC20.83■□□□□ 0.92
CDC42BPAQ5VT25 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 LINC00552-201ENST00000625151 2579 ntBASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDC42BPAQ5VT25 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 MIR611-201ENST00000384869 67 ntBASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 SDCBP2P1-201ENST00000416115 614 ntBASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AL773545.2-201ENST00000442149 472 ntBASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 PHBP18-201ENST00000546648 813 ntBASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms