Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 AL137783.1-201ENST00000623494 1896 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 MTND4P5-201ENST00000435821 1374 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 MTND4P21-201ENST00000453886 1357 ntBASIC11.14□□□□□ -0.63
LINC01559Q495D7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC01559Q495D7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01559Q495D7 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AL121929.2-201ENST00000609691 1432 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AL645937.2-201ENST00000396808 931 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 STEAP1B-202ENST00000406890 1193 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 RN7SL618P-201ENST00000477850 296 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC021106.1-201ENST00000509020 1058 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 LYSMD2-203ENST00000558126 775 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC105036.1-201ENST00000566222 271 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC006116.7-201ENST00000590141 756 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC108673.3-201ENST00000609183 335 ntBASIC11.13□□□□□ -0.63
LINC01559Q495D7 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LINC01559Q495D7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01559Q495D7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms