Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.17□□□□□ -0.78
CKS1BP61024 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 KRT18P58-201ENST00000527480 1120 ntBASIC10.17□□□□□ -0.78
CKS1BP61024 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 BANF1P1-201ENST00000553684 263 ntBASIC10.17□□□□□ -0.78
CKS1BP61024 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 AC005829.1-201ENST00000570002 483 ntBASIC10.17□□□□□ -0.78
CKS1BP61024 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 AC105339.1-204ENST00000636249 355 ntBASIC10.17□□□□□ -0.78
CKS1BP61024 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CKS1BP61024 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.17□□□□□ -0.78
CKS1BP61024 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC10.17□□□□□ -0.78
CKS1BP61024 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.16□□□□□ -0.78
CKS1BP61024 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CKS1BP61024 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.16□□□□□ -0.78
CKS1BP61024 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 Z97205.2-201ENST00000564697 1639 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CKS1BP61024 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CKS1BP61024 AL627223.1-201ENST00000416693 442 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 DNAJB3-201ENST00000446806 729 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 AC004066.1-201ENST00000502488 802 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.16□□□□□ -0.78
CKS1BP61024 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.16□□□□□ -0.78
CKS1BP61024 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.16□□□□□ -0.78
CKS1BP61024 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.16□□□□□ -0.78
CKS1BP61024 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.16□□□□□ -0.78
CKS1BP61024 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 SAMD11P1-201ENST00000571429 661 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 AL133215.2-201ENST00000609242 977 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 LINC00628-201ENST00000628516 1289 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.16□□□□□ -0.78
CKS1BP61024 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
CKS1BP61024 AL033527.5-202ENST00000641632 1098 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.16□□□□□ -0.78
CKS1BP61024 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.16□□□□□ -0.78
CKS1BP61024 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CKS1BP61024 FAM95B1-212ENST00000592873 4692 ntBASIC10.16□□□□□ -0.78
CKS1BP61024 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms