Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 AP002353.1-201ENST00000528257 1599 ntBASIC14.15□□□□□ -0.14
CDKN2DP55273 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.15□□□□□ -0.14
CDKN2DP55273 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.15□□□□□ -0.14
CDKN2DP55273 TUBB8P8-201ENST00000458717 1058 ntBASIC14.15□□□□□ -0.14
CDKN2DP55273 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 AC021723.1-201ENST00000486306 515 ntBASIC14.15□□□□□ -0.14
CDKN2DP55273 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.15□□□□□ -0.14
CDKN2DP55273 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 AGAP12P-201ENST00000585227 2359 ntBASIC14.15□□□□□ -0.14
CDKN2DP55273 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.15□□□□□ -0.15
CDKN2DP55273 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDKN2DP55273 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 KRT8P29-201ENST00000420409 1371 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CDKN2DP55273 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.14□□□□□ -0.15
CDKN2DP55273 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 XBP1P1-201ENST00000436573 652 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 AK2P2-201ENST00000439142 405 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 GOLGA2P4-201ENST00000441462 777 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 RPL13AP20-201ENST00000459725 609 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.14□□□□□ -0.15
CDKN2DP55273 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 FAM86HP-204ENST00000513466 959 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 RNA5SP412-201ENST00000516234 123 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 IGHV3-71-201ENST00000523324 359 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.14□□□□□ -0.15
CDKN2DP55273 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDKN2DP55273 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.14□□□□□ -0.15
CDKN2DP55273 AC140658.4-201ENST00000561990 352 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.14□□□□□ -0.15
CDKN2DP55273 RN7SL560P-201ENST00000577943 264 ntBASIC14.14□□□□□ -0.15
CDKN2DP55273 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.14□□□□□ -0.15
CDKN2DP55273 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms