Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.71■□□□□ 0.11
CPT1AP50416 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPT1AP50416 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPT1AP50416 AL022313.4-201ENST00000562756 2046 ntBASIC15.71■□□□□ 0.11
CPT1AP50416 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.71■□□□□ 0.11
CPT1AP50416 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPT1AP50416 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.71■□□□□ 0.11
CPT1AP50416 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.71■□□□□ 0.11
CPT1AP50416 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.71■□□□□ 0.1
CPT1AP50416 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
CPT1AP50416 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CPT1AP50416 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPT1AP50416 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPT1AP50416 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPT1AP50416 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CPT1AP50416 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.7■□□□□ 0.1
CPT1AP50416 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 MIR1301-201ENST00000408518 82 ntBASIC15.7■□□□□ 0.1
CPT1AP50416 RPL3P2-204ENST00000413027 1203 ntBASIC15.7■□□□□ 0.1
CPT1AP50416 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.7■□□□□ 0.1
CPT1AP50416 COQ10BP2-201ENST00000513804 724 ntBASIC15.7■□□□□ 0.1
CPT1AP50416 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.7■□□□□ 0.1
CPT1AP50416 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.7■□□□□ 0.1
CPT1AP50416 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.7■□□□□ 0.1
CPT1AP50416 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 RN7SL596P-201ENST00000582123 288 ntBASIC15.7■□□□□ 0.1
CPT1AP50416 AC010632.2-201ENST00000588369 1224 ntBASIC15.7■□□□□ 0.1
CPT1AP50416 PEBP1P2-201ENST00000603980 558 ntBASIC15.7■□□□□ 0.1
CPT1AP50416 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.7■□□□□ 0.1
CPT1AP50416 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPT1AP50416 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPT1AP50416 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
CPT1AP50416 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.69■□□□□ 0.1
CPT1AP50416 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CPT1AP50416 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.69■□□□□ 0.1
CPT1AP50416 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.69■□□□□ 0.1
CPT1AP50416 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.69■□□□□ 0.1
CPT1AP50416 ABCD1P4-201ENST00000399687 604 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 STK24P1-201ENST00000455035 1291 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.69■□□□□ 0.1
CPT1AP50416 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.69■□□□□ 0.1
CPT1AP50416 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.69■□□□□ 0.1
CPT1AP50416 TREHP1-201ENST00000531328 465 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 DNM1P51-201ENST00000558149 522 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 CES1P2-201ENST00000566467 1242 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.69■□□□□ 0.1
CPT1AP50416 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.69■□□□□ 0.1
CPT1AP50416 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 HMGB1P24-201ENST00000611897 328 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CPT1AP50416 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.69■□□□□ 0.1
CPT1AP50416 AL139158.3-201ENST00000641212 1562 ntBASIC15.69■□□□□ 0.1
CPT1AP50416 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.69■□□□□ 0.1
CPT1AP50416 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.69■□□□□ 0.1
CPT1AP50416 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPT1AP50416 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms