Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC1A1P43005 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 AL354877.1-201ENST00000424412 413 ntBASIC15.01□□□□□ -0.01
SLC1A1P43005 CTBP2P5-201ENST00000454986 1264 ntBASIC15.01□□□□□ -0.01
SLC1A1P43005 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC1A1P43005 PGAM1P5-201ENST00000548011 764 ntBASIC15.01□□□□□ -0.01
SLC1A1P43005 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC1A1P43005 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 RCC2P1-201ENST00000452257 1476 ntBASIC15.01□□□□□ -0.01
SLC1A1P43005 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC1A1P43005 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 AL031595.1-201ENST00000623969 4709 ntBASIC15□□□□□ -0.01
SLC1A1P43005 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15□□□□□ -0.01
SLC1A1P43005 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15□□□□□ -0.01
SLC1A1P43005 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15□□□□□ -0.01
SLC1A1P43005 AL160314.3-201ENST00000556041 767 ntBASIC15□□□□□ -0.01
SLC1A1P43005 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15□□□□□ -0.01
SLC1A1P43005 AC005962.1-201ENST00000584100 773 ntBASIC15□□□□□ -0.01
SLC1A1P43005 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15□□□□□ -0.01
SLC1A1P43005 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15□□□□□ -0.01
SLC1A1P43005 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A1P43005 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC1A1P43005 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15□□□□□ -0.01
SLC1A1P43005 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 ABCD1P2-201ENST00000429313 1601 ntBASIC14.99□□□□□ -0.01
SLC1A1P43005 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SLC1A1P43005 AL591122.2-201ENST00000624125 1853 ntBASIC14.99□□□□□ -0.01
SLC1A1P43005 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC1A1P43005 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms