Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 AL845472.1-202ENST00000624675 4080 ntBASIC10.6□□□□□ -0.71
CKS2P33552 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 AC005014.1-201ENST00000432006 2976 ntBASIC10.6□□□□□ -0.71
CKS2P33552 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 AC092123.2-201ENST00000611189 5421 ntBASIC10.6□□□□□ -0.71
CKS2P33552 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CKS2P33552 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 AL031719.1-201ENST00000623365 2587 ntBASIC10.6□□□□□ -0.71
CKS2P33552 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS2P33552 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 USP17L6P-201ENST00000382470 1197 ntBASIC10.6□□□□□ -0.71
CKS2P33552 AC023274.1-201ENST00000418278 595 ntBASIC10.6□□□□□ -0.71
CKS2P33552 FAM58DP-201ENST00000428076 619 ntBASIC10.6□□□□□ -0.71
CKS2P33552 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS2P33552 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS2P33552 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CKS2P33552 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
CKS2P33552 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC10.6□□□□□ -0.71
CKS2P33552 AL445250.1-201ENST00000641671 2259 ntBASIC10.6□□□□□ -0.71
CKS2P33552 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 VENTXP1-201ENST00000569334 2716 ntBASIC10.6□□□□□ -0.71
CKS2P33552 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CKS2P33552 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.6□□□□□ -0.71
CKS2P33552 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CKS2P33552 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CKS2P33552 HLA-A-201ENST00000376802 1334 ntBASIC10.59□□□□□ -0.71
CKS2P33552 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 Z98257.2-202ENST00000641138 1548 ntBASIC10.59□□□□□ -0.71
CKS2P33552 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CKS2P33552 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CKS2P33552 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 AC026434.2-201ENST00000506094 1078 ntBASIC10.59□□□□□ -0.71
CKS2P33552 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 AC131206.1-201ENST00000538078 1211 ntBASIC10.59□□□□□ -0.71
CKS2P33552 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.59□□□□□ -0.71
CKS2P33552 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.59□□□□□ -0.71
CKS2P33552 AC140113.2-201ENST00000604370 208 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms