Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PTX3P26022 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PTX3P26022 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.79□□□□□ -0.2
PTX3P26022 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.79□□□□□ -0.2
PTX3P26022 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.79□□□□□ -0.2
PTX3P26022 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PTX3P26022 BNIP3P42-201ENST00000454982 569 ntBASIC13.79□□□□□ -0.2
PTX3P26022 AC022217.1-201ENST00000521069 738 ntBASIC13.79□□□□□ -0.2
PTX3P26022 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.79□□□□□ -0.2
PTX3P26022 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 BNIP3P29-201ENST00000598302 571 ntBASIC13.79□□□□□ -0.2
PTX3P26022 AC239800.4-201ENST00000603712 296 ntBASIC13.79□□□□□ -0.2
PTX3P26022 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 AC011447.5-201ENST00000616168 564 ntBASIC13.79□□□□□ -0.2
PTX3P26022 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.79□□□□□ -0.2
PTX3P26022 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.79□□□□□ -0.2
PTX3P26022 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTX3P26022 CYP4F23P-201ENST00000593402 1579 ntBASIC13.79□□□□□ -0.2
PTX3P26022 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.79□□□□□ -0.2
PTX3P26022 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PTX3P26022 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.78□□□□□ -0.2
PTX3P26022 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PTX3P26022 MIR663B-201ENST00000408361 115 ntBASIC13.78□□□□□ -0.2
PTX3P26022 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.78□□□□□ -0.2
PTX3P26022 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 RPL13AP20-201ENST00000459725 609 ntBASIC13.78□□□□□ -0.2
PTX3P26022 RPL18P13-201ENST00000478088 569 ntBASIC13.78□□□□□ -0.2
PTX3P26022 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.78□□□□□ -0.2
PTX3P26022 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 PGAM1P5-201ENST00000548011 764 ntBASIC13.78□□□□□ -0.2
PTX3P26022 AL583810.1-201ENST00000553344 1045 ntBASIC13.78□□□□□ -0.2
PTX3P26022 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.78□□□□□ -0.2
PTX3P26022 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.78□□□□□ -0.2
PTX3P26022 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 AC008805.1-201ENST00000590892 364 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms