Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.35□□□□□ -0.43
CD40P25942 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
CD40P25942 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD40P25942 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 AC097359.2-201ENST00000604992 2389 ntBASIC12.34□□□□□ -0.43
CD40P25942 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.34□□□□□ -0.43
CD40P25942 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
CD40P25942 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.34□□□□□ -0.43
CD40P25942 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 MIR4522-201ENST00000584932 87 ntBASIC12.34□□□□□ -0.43
CD40P25942 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.34□□□□□ -0.43
CD40P25942 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 AL805961.1-201ENST00000642026 753 ntBASIC12.34□□□□□ -0.43
CD40P25942 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.34□□□□□ -0.43
CD40P25942 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 AC232323.1-201ENST00000540724 2099 ntBASIC12.34□□□□□ -0.43
CD40P25942 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.34□□□□□ -0.43
CD40P25942 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD40P25942 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
CD40P25942 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD40P25942 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD40P25942 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CD40P25942 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 AC092053.3-201ENST00000641308 4975 ntBASIC12.33□□□□□ -0.44
CD40P25942 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
CD40P25942 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 AL512430.1-201ENST00000392575 860 ntBASIC12.33□□□□□ -0.44
CD40P25942 AL627422.1-201ENST00000434104 580 ntBASIC12.33□□□□□ -0.44
CD40P25942 AC069218.1-201ENST00000435269 762 ntBASIC12.33□□□□□ -0.44
CD40P25942 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 RPS2P36-201ENST00000456516 831 ntBASIC12.33□□□□□ -0.44
CD40P25942 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 CHCHD2P9-201ENST00000461726 456 ntBASIC12.33□□□□□ -0.44
CD40P25942 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.33□□□□□ -0.44
CD40P25942 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.33□□□□□ -0.44
CD40P25942 AL031713.1-201ENST00000564813 661 ntBASIC12.33□□□□□ -0.44
CD40P25942 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms