Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ATP2B1P20020 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2B1P20020 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATP2B1P20020 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ATP2B1P20020 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.6■□□□□ 0.25
ATP2B1P20020 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.6■□□□□ 0.25
ATP2B1P20020 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2B1P20020 AL354877.1-201ENST00000424412 413 ntBASIC16.6■□□□□ 0.25
ATP2B1P20020 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
ATP2B1P20020 RNMTL1P1-201ENST00000454103 560 ntBASIC16.6■□□□□ 0.25
ATP2B1P20020 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2B1P20020 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 RBM8B-201ENST00000555532 525 ntBASIC16.6■□□□□ 0.25
ATP2B1P20020 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 AL162426.1-201ENST00000624141 743 ntBASIC16.6■□□□□ 0.25
ATP2B1P20020 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ATP2B1P20020 AC064801.2-201ENST00000625052 1303 ntBASIC16.6■□□□□ 0.25
ATP2B1P20020 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2B1P20020 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2B1P20020 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2B1P20020 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2B1P20020 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2B1P20020 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ATP2B1P20020 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 AC011474.4-201ENST00000623523 2076 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
ATP2B1P20020 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2B1P20020 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2B1P20020 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 AC021723.1-201ENST00000486306 515 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
ATP2B1P20020 AL096828.3-201ENST00000615354 462 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.59■□□□□ 0.25
ATP2B1P20020 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 Z98259.2-201ENST00000641583 609 ntBASIC16.59■□□□□ 0.25
ATP2B1P20020 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2B1P20020 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
ATP2B1P20020 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2B1P20020 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2B1P20020 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ATP2B1P20020 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP2B1P20020 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2B1P20020 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2B1P20020 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2B1P20020 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2B1P20020 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ATP2B1P20020 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2B1P20020 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2B1P20020 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2B1P20020 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.58■□□□□ 0.25
ATP2B1P20020 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2B1P20020 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms