Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13□□□□□ -0.33
FREM3P0C091 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13□□□□□ -0.33
FREM3P0C091 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
FREM3P0C091 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13□□□□□ -0.33
FREM3P0C091 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13□□□□□ -0.33
FREM3P0C091 FRMPD2B-201ENST00000431305 1347 ntBASIC13□□□□□ -0.33
FREM3P0C091 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13□□□□□ -0.33
FREM3P0C091 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13□□□□□ -0.33
FREM3P0C091 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 POU5F1P2-201ENST00000521750 823 ntBASIC13□□□□□ -0.33
FREM3P0C091 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13□□□□□ -0.33
FREM3P0C091 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13□□□□□ -0.33
FREM3P0C091 AC012044.1-201ENST00000603431 297 ntBASIC13□□□□□ -0.33
FREM3P0C091 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FREM3P0C091 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.99□□□□□ -0.33
FREM3P0C091 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
FREM3P0C091 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 PHBP15-201ENST00000574228 665 ntBASIC12.99□□□□□ -0.33
FREM3P0C091 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.99□□□□□ -0.33
FREM3P0C091 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.99□□□□□ -0.33
FREM3P0C091 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.99□□□□□ -0.33
FREM3P0C091 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.99□□□□□ -0.33
FREM3P0C091 AL109837.1-201ENST00000603272 613 ntBASIC12.99□□□□□ -0.33
FREM3P0C091 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 AC025262.2-201ENST00000623975 1056 ntBASIC12.99□□□□□ -0.33
FREM3P0C091 CU633904.3-201ENST00000624042 1029 ntBASIC12.99□□□□□ -0.33
FREM3P0C091 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 LINC02486-201ENST00000604157 3000 ntBASIC12.99□□□□□ -0.33
FREM3P0C091 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
FREM3P0C091 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
FREM3P0C091 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FREM3P0C091 CCT8L1P-201ENST00000465400 1674 ntBASIC12.98□□□□□ -0.33
FREM3P0C091 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM3P0C091 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
FREM3P0C091 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
FREM3P0C091 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FREM3P0C091 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.98□□□□□ -0.33
FREM3P0C091 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.98□□□□□ -0.33
FREM3P0C091 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms