Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RETP07949 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.46□□□□□ -0.1
RETP07949 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RETP07949 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.46□□□□□ -0.1
RETP07949 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RETP07949 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RETP07949 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 AC003102.2-201ENST00000589195 1469 ntBASIC14.45□□□□□ -0.1
RETP07949 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.45□□□□□ -0.1
RETP07949 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RETP07949 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RETP07949 AL357373.1-201ENST00000394974 322 ntBASIC14.45□□□□□ -0.1
RETP07949 KRT18P36-201ENST00000411618 1276 ntBASIC14.45□□□□□ -0.1
RETP07949 AL512306.1-201ENST00000432698 848 ntBASIC14.45□□□□□ -0.1
RETP07949 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 AL135901.1-201ENST00000451812 333 ntBASIC14.45□□□□□ -0.1
RETP07949 AC244197.1-201ENST00000456494 951 ntBASIC14.45□□□□□ -0.1
RETP07949 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RETP07949 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RETP07949 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.45□□□□□ -0.1
RETP07949 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.45□□□□□ -0.1
RETP07949 AC140113.1-201ENST00000603467 169 ntBASIC14.45□□□□□ -0.1
RETP07949 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 MME-218ENST00000625667 363 ntTSL 5 BASIC14.45□□□□□ -0.1
RETP07949 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.45□□□□□ -0.1
RETP07949 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RETP07949 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.45□□□□□ -0.1
RETP07949 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RETP07949 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 MRPL37P1-201ENST00000592451 1337 ntBASIC14.44□□□□□ -0.1
RETP07949 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RETP07949 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.44□□□□□ -0.1
RETP07949 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
RETP07949 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.44□□□□□ -0.1
RETP07949 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.44□□□□□ -0.1
RETP07949 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RETP07949 AP001267.2-201ENST00000532619 2086 ntBASIC14.44□□□□□ -0.1
RETP07949 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.44□□□□□ -0.1
RETP07949 TMBIM7P-202ENST00000641474 1516 ntBASIC14.44□□□□□ -0.1
RETP07949 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RETP07949 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RETP07949 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RETP07949 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.44□□□□□ -0.1
RETP07949 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RETP07949 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RETP07949 AC117489.1-201ENST00000625169 3217 ntBASIC14.43□□□□□ -0.1
RETP07949 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms