Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.25■□□□□ 0.51
COL5A2P05997 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC18.25■□□□□ 0.51
COL5A2P05997 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 DNM1P46-202ENST00000415963 882 ntBASIC18.25■□□□□ 0.51
COL5A2P05997 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC18.25■□□□□ 0.51
COL5A2P05997 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 RN7SL846P-201ENST00000467429 292 ntBASIC18.25■□□□□ 0.51
COL5A2P05997 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC18.25■□□□□ 0.51
COL5A2P05997 NDUFB2P1-201ENST00000506966 295 ntBASIC18.25■□□□□ 0.51
COL5A2P05997 ISL1-203ENST00000511384 981 ntTSL 5 BASIC18.25■□□□□ 0.51
COL5A2P05997 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC18.25■□□□□ 0.51
COL5A2P05997 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC18.25■□□□□ 0.51
COL5A2P05997 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC18.25■□□□□ 0.51
COL5A2P05997 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
COL5A2P05997 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.24■□□□□ 0.51
COL5A2P05997 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL5A2P05997 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
COL5A2P05997 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL5A2P05997 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.24■□□□□ 0.51
COL5A2P05997 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 RCC2P1-201ENST00000452257 1476 ntBASIC18.24■□□□□ 0.51
COL5A2P05997 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL5A2P05997 YY1P2-201ENST00000438766 948 ntBASIC18.24■□□□□ 0.51
COL5A2P05997 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.24■□□□□ 0.51
COL5A2P05997 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.24■□□□□ 0.51
COL5A2P05997 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC18.24■□□□□ 0.51
COL5A2P05997 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
COL5A2P05997 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL5A2P05997 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.24■□□□□ 0.51
COL5A2P05997 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.24■□□□□ 0.51
COL5A2P05997 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.24■□□□□ 0.51
COL5A2P05997 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.23■□□□□ 0.51
COL5A2P05997 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 KRT8P25-201ENST00000473150 1456 ntBASIC18.23■□□□□ 0.51
COL5A2P05997 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL5A2P05997 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 OLA1P2-201ENST00000395519 1264 ntBASIC18.23■□□□□ 0.51
COL5A2P05997 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 RN7SKP212-201ENST00000410851 328 ntBASIC18.23■□□□□ 0.51
COL5A2P05997 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC18.23■□□□□ 0.51
COL5A2P05997 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 AC007679.1-201ENST00000458609 502 ntBASIC18.23■□□□□ 0.51
COL5A2P05997 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.23■□□□□ 0.51
COL5A2P05997 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 METTL7AP1-201ENST00000547343 496 ntBASIC18.23■□□□□ 0.51
COL5A2P05997 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.23■□□□□ 0.51
COL5A2P05997 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 BX322562.1-201ENST00000617004 561 ntBASIC18.23■□□□□ 0.51
COL5A2P05997 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC18.23■□□□□ 0.51
COL5A2P05997 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC18.23■□□□□ 0.51
COL5A2P05997 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.23■□□□□ 0.51
COL5A2P05997 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
COL5A2P05997 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC18.23■□□□□ 0.51
COL5A2P05997 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms