Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
P04436 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
P04436 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
P04436 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
P04436 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P04436 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 CAP2P1-201ENST00000557743 1390 ntBASIC13.1□□□□□ -0.31
P04436 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P04436 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
P04436 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
P04436 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P04436 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 OR2K2-202ENST00000374428 1038 ntBASIC13.1□□□□□ -0.31
P04436 AL627231.1-201ENST00000394467 1125 ntBASIC13.1□□□□□ -0.31
P04436 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.1□□□□□ -0.31
P04436 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.1□□□□□ -0.31
P04436 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.1□□□□□ -0.31
P04436 DUTP3-201ENST00000450025 415 ntBASIC13.1□□□□□ -0.31
P04436 CEP164P1-201ENST00000455142 418 ntBASIC13.1□□□□□ -0.31
P04436 AC114947.1-202ENST00000514136 344 ntBASIC13.1□□□□□ -0.31
P04436 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
P04436 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
P04436 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
P04436 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.1□□□□□ -0.31
P04436 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.1□□□□□ -0.31
P04436 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.1□□□□□ -0.31
P04436 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.1□□□□□ -0.31
P04436 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
P04436 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
P04436 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P04436 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
P04436 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
P04436 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P04436 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
P04436 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.09□□□□□ -0.31
P04436 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.09□□□□□ -0.31
P04436 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
P04436 AC016629.1-201ENST00000596579 586 ntBASIC13.09□□□□□ -0.31
P04436 AC007326.1-201ENST00000604539 458 ntBASIC13.09□□□□□ -0.31
P04436 MARK2P16-201ENST00000605714 1723 ntBASIC13.09□□□□□ -0.31
P04436 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.09□□□□□ -0.31
P04436 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.09□□□□□ -0.31
P04436 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.09□□□□□ -0.31
P04436 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
P04436 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.09□□□□□ -0.31
P04436 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
P04436 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04436 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms