Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.08■□□□□ 0.01
OPHN1O60890 AC020910.6-201ENST00000623084 1459 ntBASIC15.08■□□□□ 0.01
OPHN1O60890 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
OPHN1O60890 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
OPHN1O60890 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.08■□□□□ 0.01
OPHN1O60890 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
OPHN1O60890 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.08■□□□□ 0.01
OPHN1O60890 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 AC016397.2-201ENST00000624848 1985 ntBASIC15.08■□□□□ 0
OPHN1O60890 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.08■□□□□ 0
OPHN1O60890 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 AL008707.1-201ENST00000422498 534 ntBASIC15.08■□□□□ 0
OPHN1O60890 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 AC253536.4-201ENST00000440539 267 ntBASIC15.08■□□□□ 0
OPHN1O60890 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.08■□□□□ 0
OPHN1O60890 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.08■□□□□ 0
OPHN1O60890 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.08■□□□□ 0
OPHN1O60890 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.08■□□□□ 0
OPHN1O60890 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.08■□□□□ 0
OPHN1O60890 U62317.3-201ENST00000608319 855 ntBASIC15.08■□□□□ 0
OPHN1O60890 AC097724.1-201ENST00000609581 426 ntBASIC15.08■□□□□ 0
OPHN1O60890 AP001505.2-201ENST00000616815 443 ntBASIC15.08■□□□□ 0
OPHN1O60890 AL353726.2-201ENST00000623259 884 ntBASIC15.08■□□□□ 0
OPHN1O60890 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.08■□□□□ 0
OPHN1O60890 AC128714.1-201ENST00000637035 887 ntBASIC15.08■□□□□ 0
OPHN1O60890 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.08■□□□□ 0
OPHN1O60890 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.08■□□□□ 0
OPHN1O60890 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.08■□□□□ 0
OPHN1O60890 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.08■□□□□ 0
OPHN1O60890 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
OPHN1O60890 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.08■□□□□ 0
OPHN1O60890 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
OPHN1O60890 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
OPHN1O60890 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 AC009093.2-202ENST00000620513 2079 ntBASIC15.07■□□□□ 0
OPHN1O60890 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.07■□□□□ 0
OPHN1O60890 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.07■□□□□ 0
OPHN1O60890 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.07■□□□□ 0
OPHN1O60890 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 AC016700.1-201ENST00000429424 312 ntBASIC15.07■□□□□ 0
OPHN1O60890 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.07■□□□□ 0
OPHN1O60890 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.07■□□□□ 0
OPHN1O60890 Z97180.1-201ENST00000445173 988 ntBASIC15.07■□□□□ 0
OPHN1O60890 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 LDHBP1-201ENST00000455730 1119 ntBASIC15.07■□□□□ 0
OPHN1O60890 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 SERPINA13P-202ENST00000478994 924 ntBASIC15.07■□□□□ 0
OPHN1O60890 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
OPHN1O60890 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.07■□□□□ 0
OPHN1O60890 AC012617.1-204ENST00000586340 2305 ntBASIC15.07■□□□□ 0
OPHN1O60890 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms