Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
COLCA2A8K830 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
COLCA2A8K830 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 SLED1-202ENST00000512051 380 ntBASIC10.91□□□□□ -0.66
COLCA2A8K830 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 IGHV3-65-201ENST00000523210 341 ntBASIC10.91□□□□□ -0.66
COLCA2A8K830 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.91□□□□□ -0.66
COLCA2A8K830 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.91□□□□□ -0.66
COLCA2A8K830 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 SNX21-213ENST00000614929 587 ntTSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
COLCA2A8K830 AC011511.5-201ENST00000589379 3219 ntBASIC10.91□□□□□ -0.66
COLCA2A8K830 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
COLCA2A8K830 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
COLCA2A8K830 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC10.91□□□□□ -0.66
COLCA2A8K830 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 PEX7-202ENST00000367756 680 ntTSL 3 BASIC10.9□□□□□ -0.66
COLCA2A8K830 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 SNORA50C-201ENST00000408535 133 ntBASIC10.9□□□□□ -0.66
COLCA2A8K830 CHCHD2P8-201ENST00000429873 447 ntBASIC10.9□□□□□ -0.66
COLCA2A8K830 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC10.9□□□□□ -0.66
COLCA2A8K830 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
COLCA2A8K830 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.9□□□□□ -0.66
COLCA2A8K830 AL138918.1-201ENST00000568306 659 ntBASIC10.9□□□□□ -0.66
COLCA2A8K830 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.9□□□□□ -0.66
COLCA2A8K830 AC006557.2-201ENST00000592985 1240 ntBASIC10.9□□□□□ -0.66
COLCA2A8K830 SNORA50.1-201ENST00000628590 135 ntBASIC10.9□□□□□ -0.66
COLCA2A8K830 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC10.9□□□□□ -0.66
COLCA2A8K830 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
COLCA2A8K830 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
COLCA2A8K830 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms