Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 AC041040.1-201ENST00000425197 460 ntBASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 AC079250.1-201ENST00000456046 531 ntBASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 RN7SL33P-201ENST00000462543 342 ntBASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 AC245369.8-201ENST00000636589 306 ntBASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88BA6NKF7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AC064801.2-201ENST00000625052 1303 ntBASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AL391005.1-201ENST00000623953 2435 ntBASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 MIR4309-201ENST00000582498 83 ntBASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AL109954.3-201ENST00000615088 558 ntBASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AC015909.5-201ENST00000624336 2266 ntBASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88BA6NKF7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC026271.1-201ENST00000447794 1348 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 DLX4-206ENST00000611342 1662 ntBASIC16.21■□□□□ 0.19
TMEM88BA6NKF7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms