Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 MTX1P1-201ENST00000440904 838 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AC100827.2-201ENST00000563214 1194 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 OR10AE1P-201ENST00000606962 1029 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 MIR6720-201ENST00000611664 98 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 HSPA7-201ENST00000445535 1927 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 MTND5P31-201ENST00000419366 1374 ntBASIC16.13■□□□□ 0.17
PCDHB13Q9Y5F0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AC244394.1-201ENST00000435000 1665 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 SNORA72.3-201ENST00000365074 132 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 BTBD6P1-201ENST00000412176 1267 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AL157407.1-201ENST00000435784 904 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 MTND1P36-201ENST00000522384 936 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 MTND2P38-201ENST00000522536 667 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AC005586.2-201ENST00000563946 837 ntBASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB13Q9Y5F0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms