Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AIG1-203ENST00000367596 559 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 RN7SL173P-201ENST00000461853 292 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 RN7SL672P-201ENST00000474091 317 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 RPSAP70-201ENST00000504462 864 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 GOLGA2P8-201ENST00000505201 779 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 NF1P11-201ENST00000621292 1282 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 BX322534.1-201ENST00000635574 241 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 AC215524.1-201ENST00000635696 241 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 AC105917.1-201ENST00000506637 2539 ntBASIC16.02■□□□□ 0.15
TRIM17Q9Y577 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM17Q9Y577 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 SHMT1P1-201ENST00000419974 1312 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 C8orf49-201ENST00000525043 1968 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 FDPSP7-201ENST00000429043 1054 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AP000533.1-201ENST00000456143 1177 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 SNRPD2P2-201ENST00000473818 333 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 TBC1D3P6-201ENST00000505954 962 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC005586.2-201ENST00000563946 837 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AP001462.1-201ENST00000594089 452 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC010503.4-201ENST00000615487 688 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC005865.2-202ENST00000635814 725 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM17Q9Y577 AL137077.2-201ENST00000635124 1608 ntBASIC16.01■□□□□ 0.15
TRIM17Q9Y577 LILRP2-202ENST00000413572 1383 ntBASIC16■□□□□ 0.15
TRIM17Q9Y577 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM17Q9Y577 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM17Q9Y577 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM17Q9Y577 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM17Q9Y577 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms