Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 PDIA3P2-201ENST00000428073 158 ntBASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC073150.1-201ENST00000450406 1084 ntBASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC079328.1-201ENST00000560358 952 ntBASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC079336.7-201ENST00000623428 1078 ntBASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 AC089987.1-201ENST00000551654 2209 ntBASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIP2Q9UDT6 KRT8P19-201ENST00000551916 1455 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 AL133499.1-201ENST00000596207 608 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 AC015967.2-201ENST00000624092 234 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 AC006435.4-201ENST00000625037 234 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 AL356737.1-201ENST00000634391 234 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 MST1P2-201ENST00000457982 2291 ntBASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIP2Q9UDT6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AHCYP4-201ENST00000419201 1315 ntBASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms