Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 RPL18P13-201ENST00000478088 569 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 AC006122.1-201ENST00000493323 440 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 HLA-J-204ENST00000495278 958 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 MIR4538-201ENST00000581377 78 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 AL118558.3-201ENST00000607414 1079 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 MIR6799-201ENST00000620297 69 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 AC068587.8-201ENST00000641239 219 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 FAM90A7P-201ENST00000382628 1395 ntBASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 FAM90A23P-201ENST00000400136 1395 ntBASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AL161932.2-201ENST00000435436 679 ntBASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 ST13P19-201ENST00000442505 1124 ntBASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AC133540.1-201ENST00000620845 1019 ntBASIC15.02■□□□□ -0
PPARGC1AQ9UBK2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 CYP4F23P-201ENST00000593402 1579 ntBASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 CICP20-201ENST00000443330 2801 ntBASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PPARGC1AQ9UBK2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 AC064801.2-201ENST00000625052 1303 ntBASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 AC106794.1-201ENST00000506935 792 ntBASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.01□□□□□ -0.01
PPARGC1AQ9UBK2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms