Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL807761.2-201ENST00000422849 729 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 TMEM198B-204ENST00000484016 896 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AC138894.2-201ENST00000602838 371 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AL353726.2-201ENST00000623259 884 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AL359881.3-201ENST00000602640 1721 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HMG20BQ9P0W2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMG20BQ9P0W2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMG20BQ9P0W2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMG20BQ9P0W2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 MIR4706-201ENST00000582134 82 ntBASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 AC007326.1-201ENST00000604539 458 ntBASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 KRT8P24-201ENST00000560290 1559 ntBASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 TUBB8P4-201ENST00000511806 1324 ntBASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 AC006480.2-201ENST00000609770 1337 ntBASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20BQ9P0W2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 ALG1L13P-202ENST00000519320 584 ntBASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 MIR4522-201ENST00000584932 87 ntBASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 BEND3P1-201ENST00000421591 1944 ntBASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20BQ9P0W2 MST1P2-201ENST00000457982 2291 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms