Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HSPB1P2-201ENST00000448722 546 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 AC108725.1-201ENST00000495472 409 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 SNORA48.9-201ENST00000516419 162 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 AP006547.1-201ENST00000563435 692 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 MIR4538-201ENST00000581377 78 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 AC104982.3-201ENST00000581995 514 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 AL390755.1-201ENST00000623716 2027 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 DUXAP7-201ENST00000431038 689 ntBASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AL022319.1-201ENST00000458183 1167 ntBASIC13.09□□□□□ -0.31
USB1Q9BQ65 TUBB8P8-201ENST00000458717 1058 ntBASIC13.09□□□□□ -0.31
USB1Q9BQ65 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC106868.1-201ENST00000505272 992 ntBASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC126915.1-201ENST00000522847 1038 ntBASIC13.09□□□□□ -0.31
USB1Q9BQ65 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 AL008638.5-201ENST00000623814 1298 ntBASIC13.09□□□□□ -0.31
USB1Q9BQ65 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
USB1Q9BQ65 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
USB1Q9BQ65 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
USB1Q9BQ65 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
USB1Q9BQ65 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
USB1Q9BQ65 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
USB1Q9BQ65 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
USB1Q9BQ65 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
USB1Q9BQ65 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms