Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 MYCLP2-201ENST00000449268 967 ntBASIC13.35□□□□□ -0.27
HPS1Q92902 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 SLED1-202ENST00000512051 380 ntBASIC13.35□□□□□ -0.27
HPS1Q92902 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.35□□□□□ -0.27
HPS1Q92902 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HPS1Q92902 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.35□□□□□ -0.27
HPS1Q92902 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.35□□□□□ -0.27
HPS1Q92902 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.35□□□□□ -0.27
HPS1Q92902 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.35□□□□□ -0.27
HPS1Q92902 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
HPS1Q92902 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HPS1Q92902 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.35□□□□□ -0.27
HPS1Q92902 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HPS1Q92902 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 AC134407.3-201ENST00000624035 2139 ntBASIC13.34□□□□□ -0.27
HPS1Q92902 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HPS1Q92902 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.34□□□□□ -0.27
HPS1Q92902 AC015819.3-201ENST00000624305 2674 ntBASIC13.34□□□□□ -0.27
HPS1Q92902 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 KRT8P22-201ENST00000562317 1415 ntBASIC13.34□□□□□ -0.27
HPS1Q92902 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.34□□□□□ -0.27
HPS1Q92902 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.34□□□□□ -0.27
HPS1Q92902 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC13.34□□□□□ -0.27
HPS1Q92902 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC13.34□□□□□ -0.27
HPS1Q92902 SPDYE18-201ENST00000510091 1050 ntBASIC13.34□□□□□ -0.27
HPS1Q92902 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HPS1Q92902 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.34□□□□□ -0.27
HPS1Q92902 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HPS1Q92902 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.34□□□□□ -0.27
HPS1Q92902 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.34□□□□□ -0.27
HPS1Q92902 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.34□□□□□ -0.27
HPS1Q92902 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HPS1Q92902 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HPS1Q92902 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.34□□□□□ -0.27
HPS1Q92902 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
HPS1Q92902 AC022400.8-201ENST00000623453 3599 ntBASIC13.33□□□□□ -0.27
HPS1Q92902 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HPS1Q92902 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HPS1Q92902 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.33□□□□□ -0.27
HPS1Q92902 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HPS1Q92902 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.33□□□□□ -0.28
HPS1Q92902 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.33□□□□□ -0.28
HPS1Q92902 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.33□□□□□ -0.28
HPS1Q92902 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HPS1Q92902 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HPS1Q92902 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HPS1Q92902 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms