Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 BX284668.4-201ENST00000453917 508 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AC121493.1-201ENST00000602316 450 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AL805961.1-203ENST00000641078 1258 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 AC138028.6-201ENST00000616106 1482 ntBASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.13■□□□□ 0.01
SCUBE3Q8IX30 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC090643.2-201ENST00000623442 2029 ntBASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC011742.3-201ENST00000439053 820 ntBASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCUBE3Q8IX30 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms