Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AP000911.2-201ENST00000534330 502 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC027237.1-201ENST00000560942 655 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC117489.1-201ENST00000625169 3217 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 AC026748.1-201ENST00000624349 3251 ntBASIC15.27■□□□□ 0.04
RNF135Q8IUD6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.04
RNF135Q8IUD6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF135Q8IUD6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 FAM45BP-202ENST00000592932 1624 ntBASIC15.27■□□□□ 0.03
RNF135Q8IUD6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF135Q8IUD6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC018529.2-202ENST00000611482 3087 ntBASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC144522.1-201ENST00000625111 1658 ntBASIC15.26■□□□□ 0.03
RNF135Q8IUD6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 TSPY25P-201ENST00000429463 745 ntBASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC006122.1-201ENST00000493323 440 ntBASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms