Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RFWD3Q6PCD5 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
RFWD3Q6PCD5 AL157813.1-201ENST00000612996 587 ntBASIC15.02■□□□□ -0
RFWD3Q6PCD5 AP001505.2-201ENST00000616815 443 ntBASIC15.02■□□□□ -0
RFWD3Q6PCD5 AC100757.4-201ENST00000626934 759 ntBASIC15.02■□□□□ -0
RFWD3Q6PCD5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.02■□□□□ -0
RFWD3Q6PCD5 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.02■□□□□ -0
RFWD3Q6PCD5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
RFWD3Q6PCD5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 AC015802.1-201ENST00000588104 1449 ntBASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFWD3Q6PCD5 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 MAPT-IT1-201ENST00000624111 3016 ntBASIC15□□□□□ -0.01
RFWD3Q6PCD5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AL008707.1-201ENST00000422498 534 ntBASIC15□□□□□ -0.01
RFWD3Q6PCD5 Z97180.1-201ENST00000445173 988 ntBASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC003686.1-201ENST00000550956 1034 ntBASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 NAP1L6-202ENST00000641404 1222 ntBASIC15□□□□□ -0.01
RFWD3Q6PCD5 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15□□□□□ -0.01
RFWD3Q6PCD5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFWD3Q6PCD5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms