Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 PMEL-214ENST00000550447 901 ntTSL 3 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 GRAMD4P6-201ENST00000556999 244 ntBASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 RN7SL602P-201ENST00000578326 324 ntBASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 RN7SL718P-201ENST00000581254 303 ntBASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 CSTP2-201ENST00000610599 398 ntBASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 TPO-203ENST00000346956 2923 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 AL513497.1-201ENST00000624273 2083 ntBASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 HNRNPA3P12-201ENST00000437410 1063 ntBASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 AC015818.1-201ENST00000451011 244 ntBASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 AC009041.4-201ENST00000620075 638 ntBASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42BPAQ5VT25 AC061965.1-201ENST00000560524 1465 ntBASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AL121949.3-201ENST00000406684 385 ntBASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AC098657.1-201ENST00000416270 1135 ntBASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AC092910.2-201ENST00000491262 348 ntBASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AC010202.1-201ENST00000551181 405 ntBASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 SNORA50D-202ENST00000627561 132 ntBASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42BPAQ5VT25 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 CCL19-202ENST00000378800 414 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 SERBP1P2-201ENST00000436888 1164 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 KRT8P25-201ENST00000473150 1456 ntBASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42BPAQ5VT25 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms