Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 AGAP10P-201ENST00000454844 2418 ntBASIC15.51■□□□□ 0.07
SNRPFP62306 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SNRPFP62306 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRPFP62306 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SNRPFP62306 AL161670.2-201ENST00000557650 1227 ntBASIC15.51■□□□□ 0.07
SNRPFP62306 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.51■□□□□ 0.07
SNRPFP62306 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.51■□□□□ 0.07
SNRPFP62306 MIR4525-201ENST00000580000 75 ntBASIC15.51■□□□□ 0.07
SNRPFP62306 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SNRPFP62306 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRPFP62306 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRPFP62306 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRPFP62306 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRPFP62306 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SNRPFP62306 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 MIR769-201ENST00000390225 118 ntBASIC15.5■□□□□ 0.07
SNRPFP62306 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.5■□□□□ 0.07
SNRPFP62306 CYP46A4P-201ENST00000414953 267 ntBASIC15.5■□□□□ 0.07
SNRPFP62306 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRPFP62306 ISCA2P1-201ENST00000425548 448 ntBASIC15.5■□□□□ 0.07
SNRPFP62306 CALR4P-201ENST00000431943 946 ntBASIC15.5■□□□□ 0.07
SNRPFP62306 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.5■□□□□ 0.07
SNRPFP62306 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.5■□□□□ 0.07
SNRPFP62306 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SNRPFP62306 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRPFP62306 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SNRPFP62306 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.5■□□□□ 0.07
SNRPFP62306 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.5■□□□□ 0.07
SNRPFP62306 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRPFP62306 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SNRPFP62306 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
SNRPFP62306 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRPFP62306 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRPFP62306 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRPFP62306 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRPFP62306 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.49■□□□□ 0.07
SNRPFP62306 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SNRPFP62306 AL928654.5-201ENST00000624831 2501 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
SNRPFP62306 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.49■□□□□ 0.07
SNRPFP62306 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.49■□□□□ 0.07
SNRPFP62306 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms