Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 AC007663.3-201ENST00000609632 465 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK2P53671 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LIMK2P53671 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
LIMK2P53671 AL136309.1-201ENST00000403917 691 ntBASIC14.5□□□□□ -0.09
LIMK2P53671 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK2P53671 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK2P53671 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK2P53671 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.5□□□□□ -0.09
LIMK2P53671 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.5□□□□□ -0.09
LIMK2P53671 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK2P53671 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK2P53671 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 AC008825.2-201ENST00000603374 718 ntBASIC14.5□□□□□ -0.09
LIMK2P53671 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.5□□□□□ -0.09
LIMK2P53671 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 BAP1-211ENST00000615113 489 ntBASIC14.5□□□□□ -0.09
LIMK2P53671 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LIMK2P53671 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK2P53671 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK2P53671 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LIMK2P53671 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 TCAF1P1-201ENST00000414990 2232 ntBASIC14.49□□□□□ -0.09
LIMK2P53671 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms