Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB2P52799 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
EFNB2P52799 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB2P52799 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
EFNB2P52799 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
EFNB2P52799 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB2P52799 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB2P52799 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 AL031595.1-201ENST00000623969 4709 ntBASIC12.47□□□□□ -0.41
EFNB2P52799 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
EFNB2P52799 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB2P52799 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB2P52799 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 TMEM14DP-201ENST00000422205 345 ntBASIC12.47□□□□□ -0.41
EFNB2P52799 AL161932.2-201ENST00000435436 679 ntBASIC12.47□□□□□ -0.41
EFNB2P52799 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB2P52799 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB2P52799 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB2P52799 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB2P52799 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB2P52799 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 AC015936.2-201ENST00000593177 259 ntBASIC12.47□□□□□ -0.41
EFNB2P52799 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
EFNB2P52799 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
EFNB2P52799 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB2P52799 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.47□□□□□ -0.41
EFNB2P52799 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB2P52799 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
EFNB2P52799 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
EFNB2P52799 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
EFNB2P52799 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.46□□□□□ -0.41
EFNB2P52799 KRT8P28-201ENST00000433288 1390 ntBASIC12.46□□□□□ -0.41
EFNB2P52799 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB2P52799 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
EFNB2P52799 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
EFNB2P52799 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 AC009093.2-202ENST00000620513 2079 ntBASIC12.46□□□□□ -0.41
EFNB2P52799 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.46□□□□□ -0.41
EFNB2P52799 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.46□□□□□ -0.41
EFNB2P52799 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
EFNB2P52799 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB2P52799 MIR1909-201ENST00000411312 80 ntBASIC12.46□□□□□ -0.41
EFNB2P52799 SOCS2P1-201ENST00000417727 557 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms