Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC01783-202ENST00000614408 828 ntBASIC16.8■□□□□ 0.28
NEDD4P46934 BX284668.2-205ENST00000619677 828 ntBASIC16.8■□□□□ 0.28
NEDD4P46934 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NEDD4P46934 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEDD4P46934 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.8■□□□□ 0.28
NEDD4P46934 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEDD4P46934 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NEDD4P46934 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEDD4P46934 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEDD4P46934 MYO15B-237ENST00000642007 4893 ntBASIC16.8■□□□□ 0.28
NEDD4P46934 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NEDD4P46934 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NEDD4P46934 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 AL133466.1-201ENST00000447582 150 ntBASIC16.79■□□□□ 0.28
NEDD4P46934 RPSAP15-201ENST00000448168 861 ntBASIC16.79■□□□□ 0.28
NEDD4P46934 AL353637.1-201ENST00000451571 732 ntBASIC16.79■□□□□ 0.28
NEDD4P46934 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.79■□□□□ 0.28
NEDD4P46934 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.79■□□□□ 0.28
NEDD4P46934 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.79■□□□□ 0.28
NEDD4P46934 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 AC079336.7-201ENST00000623428 1078 ntBASIC16.79■□□□□ 0.28
NEDD4P46934 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 KRT8P31-201ENST00000504812 1408 ntBASIC16.79■□□□□ 0.28
NEDD4P46934 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.79■□□□□ 0.28
NEDD4P46934 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NEDD4P46934 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.79■□□□□ 0.28
NEDD4P46934 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NEDD4P46934 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
NEDD4P46934 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.78■□□□□ 0.28
NEDD4P46934 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.78■□□□□ 0.28
NEDD4P46934 HMGA1P1-201ENST00000415560 1062 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.78■□□□□ 0.28
NEDD4P46934 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.78■□□□□ 0.28
NEDD4P46934 RPL8P2-201ENST00000430538 502 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 CEP164P1-201ENST00000455142 418 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 RN7SL258P-201ENST00000478664 300 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 RN7SL720P-201ENST00000488178 304 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 RN7SL67P-201ENST00000492147 296 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NEDD4P46934 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.78■□□□□ 0.28
NEDD4P46934 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.78■□□□□ 0.28
NEDD4P46934 AL133499.1-201ENST00000596207 608 ntBASIC16.78■□□□□ 0.28
NEDD4P46934 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.78■□□□□ 0.28
NEDD4P46934 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.78■□□□□ 0.28
NEDD4P46934 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NEDD4P46934 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms