Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC5P40937 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC5P40937 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC5P40937 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFC5P40937 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 RPL13AP3-202ENST00000494676 1473 ntBASIC15.8■□□□□ 0.12
RFC5P40937 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.8■□□□□ 0.12
RFC5P40937 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.8■□□□□ 0.12
RFC5P40937 ALG1L13P-202ENST00000519320 584 ntBASIC15.8■□□□□ 0.12
RFC5P40937 MTND2P7-201ENST00000521337 640 ntBASIC15.8■□□□□ 0.12
RFC5P40937 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
RFC5P40937 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.8■□□□□ 0.12
RFC5P40937 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.8■□□□□ 0.12
RFC5P40937 AC009560.1-201ENST00000620208 434 ntBASIC15.8■□□□□ 0.12
RFC5P40937 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.8■□□□□ 0.12
RFC5P40937 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC5P40937 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC5P40937 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC5P40937 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFC5P40937 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFC5P40937 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC5P40937 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.79■□□□□ 0.12
RFC5P40937 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RFC5P40937 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC5P40937 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.79■□□□□ 0.12
RFC5P40937 AC026316.1-201ENST00000398900 414 ntBASIC15.79■□□□□ 0.12
RFC5P40937 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFC5P40937 AC006987.1-201ENST00000413610 527 ntBASIC15.79■□□□□ 0.12
RFC5P40937 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.79■□□□□ 0.12
RFC5P40937 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC5P40937 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC5P40937 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.79■□□□□ 0.12
RFC5P40937 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.79■□□□□ 0.12
RFC5P40937 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.79■□□□□ 0.12
RFC5P40937 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC5P40937 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.79■□□□□ 0.12
RFC5P40937 AC103691.2-201ENST00000618824 433 ntBASIC15.79■□□□□ 0.12
RFC5P40937 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC5P40937 AC128714.1-201ENST00000637035 887 ntBASIC15.79■□□□□ 0.12
RFC5P40937 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms