Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RXRBP28702 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
RXRBP28702 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RXRBP28702 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RXRBP28702 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RXRBP28702 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RXRBP28702 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RXRBP28702 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 PCDHA1-201ENST00000378133 2726 ntBASIC18.17■□□□□ 0.5
RXRBP28702 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC18.17■□□□□ 0.5
RXRBP28702 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC18.17■□□□□ 0.5
RXRBP28702 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 TFAM-201ENST00000373895 973 ntTSL 2 BASIC18.17■□□□□ 0.5
RXRBP28702 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 AC103592.1-201ENST00000394513 664 ntBASIC18.17■□□□□ 0.5
RXRBP28702 RBMXP1-201ENST00000408004 1191 ntBASIC18.17■□□□□ 0.5
RXRBP28702 AL121994.1-201ENST00000413189 402 ntBASIC18.17■□□□□ 0.5
RXRBP28702 AC008267.3-201ENST00000448776 712 ntBASIC18.17■□□□□ 0.5
RXRBP28702 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC18.17■□□□□ 0.5
RXRBP28702 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 RAB42P1-201ENST00000555078 316 ntBASIC18.17■□□□□ 0.5
RXRBP28702 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC18.17■□□□□ 0.5
RXRBP28702 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC18.17■□□□□ 0.5
RXRBP28702 AP001505.1-201ENST00000569966 824 ntBASIC18.17■□□□□ 0.5
RXRBP28702 RN7SL322P-201ENST00000583519 299 ntBASIC18.17■□□□□ 0.5
RXRBP28702 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.17■□□□□ 0.5
RXRBP28702 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 PES1P2-201ENST00000449745 1735 ntBASIC18.17■□□□□ 0.5
RXRBP28702 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 AC011270.2-201ENST00000624293 2550 ntBASIC18.17■□□□□ 0.5
RXRBP28702 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RXRBP28702 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RXRBP28702 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.17■□□□□ 0.5
RXRBP28702 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.16■□□□□ 0.5
RXRBP28702 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 AC011477.7-201ENST00000617163 1440 ntBASIC18.16■□□□□ 0.5
RXRBP28702 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.16■□□□□ 0.5
RXRBP28702 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.16■□□□□ 0.5
RXRBP28702 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.16■□□□□ 0.5
RXRBP28702 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC18.16■□□□□ 0.5
RXRBP28702 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC18.16■□□□□ 0.5
RXRBP28702 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC18.16■□□□□ 0.5
RXRBP28702 RN7SL5P-201ENST00000581458 321 ntBASIC18.16■□□□□ 0.5
RXRBP28702 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC18.16■□□□□ 0.5
RXRBP28702 CALM3-206ENST00000594523 540 ntTSL 4 BASIC18.16■□□□□ 0.5
RXRBP28702 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 AC104506.1-201ENST00000609247 429 ntBASIC18.16■□□□□ 0.5
RXRBP28702 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 AC023024.2-201ENST00000623561 1993 ntBASIC18.16■□□□□ 0.5
RXRBP28702 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
RXRBP28702 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RXRBP28702 AL139424.2-202ENST00000641335 1369 ntBASIC18.16■□□□□ 0.5
RXRBP28702 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RXRBP28702 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.15■□□□□ 0.5
RXRBP28702 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
RXRBP28702 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RXRBP28702 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
RXRBP28702 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RXRBP28702 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.15■□□□□ 0.5
RXRBP28702 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms