Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
IFNA1P01562 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.4□□□□□ -0.58
IFNA1P01562 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 SLC25A39P2-201ENST00000537614 270 ntBASIC11.4□□□□□ -0.58
IFNA1P01562 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.4□□□□□ -0.58
IFNA1P01562 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 BANF1P1-201ENST00000553684 263 ntBASIC11.4□□□□□ -0.58
IFNA1P01562 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.4□□□□□ -0.58
IFNA1P01562 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.4□□□□□ -0.58
IFNA1P01562 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
IFNA1P01562 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
IFNA1P01562 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
IFNA1P01562 AL035456.1-201ENST00000456064 1369 ntBASIC11.4□□□□□ -0.59
IFNA1P01562 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
IFNA1P01562 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
IFNA1P01562 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
IFNA1P01562 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
IFNA1P01562 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
IFNA1P01562 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.4□□□□□ -0.59
IFNA1P01562 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.4□□□□□ -0.59
IFNA1P01562 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
IFNA1P01562 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
IFNA1P01562 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
IFNA1P01562 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
IFNA1P01562 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
IFNA1P01562 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 PI4KAP2-201ENST00000360806 2080 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 FAAHP1-202ENST00000446499 1238 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 AC093909.1-201ENST00000504731 1122 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 MSNP1-201ENST00000511640 1732 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.39□□□□□ -0.59
IFNA1P01562 AC243562.1-201ENST00000560672 389 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.39□□□□□ -0.59
IFNA1P01562 AC025048.3-201ENST00000590609 569 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.39□□□□□ -0.59
IFNA1P01562 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 AC064836.3-201ENST00000607928 673 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms