Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 AL139158.3-201ENST00000641212 1562 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TIMP1P01033 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TIMP1P01033 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 CCL25-202ENST00000315626 450 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP1P01033 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP1P01033 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP1P01033 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP1P01033 VDAC1P11-201ENST00000458323 852 ntBASIC15.18■□□□□ 0.02
TIMP1P01033 RNU1-80P-201ENST00000459500 161 ntBASIC15.18■□□□□ 0.02
TIMP1P01033 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 MBP-230ENST00000528160 584 ntTSL 5 BASIC15.18■□□□□ 0.02
TIMP1P01033 AP000920.1-201ENST00000531824 344 ntBASIC15.18■□□□□ 0.02
TIMP1P01033 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP1P01033 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.18■□□□□ 0.02
TIMP1P01033 AC132812.1-201ENST00000583145 892 ntBASIC15.18■□□□□ 0.02
TIMP1P01033 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TIMP1P01033 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TIMP1P01033 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TIMP1P01033 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TIMP1P01033 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 PPT1-215ENST00000641471 2368 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TIMP1P01033 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TIMP1P01033 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC15.17■□□□□ 0.02
TIMP1P01033 MED15P3-201ENST00000413613 326 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC15.17■□□□□ 0.02
TIMP1P01033 AL359092.2-201ENST00000423330 585 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 CDK4P1-201ENST00000454213 828 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC15.17■□□□□ 0.02
TIMP1P01033 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC15.17■□□□□ 0.02
TIMP1P01033 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 RN7SL480P-201ENST00000581481 294 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 MEP1AP1-201ENST00000636082 1097 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 CICP6-201ENST00000457191 2729 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 PES1P2-201ENST00000449745 1735 ntBASIC15.17■□□□□ 0.02
TIMP1P01033 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.17■□□□□ 0.02
TIMP1P01033 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TIMP1P01033 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TIMP1P01033 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms