Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.86□□□□□ -0.35
ZIC3O60481 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 CAP2P1-201ENST00000557743 1390 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 AC117489.1-201ENST00000625169 3217 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 AL583805.1-201ENST00000391389 531 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 AL627231.1-201ENST00000394467 1125 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 RPL8P2-201ENST00000430538 502 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 CHCHD2P2-201ENST00000503744 321 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 IGLV3-15-201ENST00000518356 244 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.86□□□□□ -0.35
ZIC3O60481 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.86□□□□□ -0.35
ZIC3O60481 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 AC015967.2-201ENST00000624092 234 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 AC006435.4-201ENST00000625037 234 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 AL356737.1-201ENST00000634391 234 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 AC068587.10-201ENST00000641210 219 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC3O60481 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.86□□□□□ -0.35
ZIC3O60481 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC3O60481 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZIC3O60481 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 MARK2P16-201ENST00000605714 1723 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ZIC3O60481 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 SNX18-202ENST00000343017 3140 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 MST1P2-201ENST00000457982 2291 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ZIC3O60481 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms