Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 CU639417.3-201ENST00000624240 1404 ntBASIC11.55□□□□□ -0.56
UPK2O00526 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
UPK2O00526 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK2O00526 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.55□□□□□ -0.56
UPK2O00526 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK2O00526 CNN2P10-201ENST00000443067 918 ntBASIC11.55□□□□□ -0.56
UPK2O00526 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK2O00526 HIST2H2BB-201ENST00000449108 381 ntBASIC11.55□□□□□ -0.56
UPK2O00526 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.55□□□□□ -0.56
UPK2O00526 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 RBM8B-201ENST00000555532 525 ntBASIC11.55□□□□□ -0.56
UPK2O00526 AL596325.1-201ENST00000563991 1082 ntBASIC11.55□□□□□ -0.56
UPK2O00526 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.55□□□□□ -0.56
UPK2O00526 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK2O00526 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK2O00526 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 MIR6720-201ENST00000611664 98 ntBASIC11.55□□□□□ -0.56
UPK2O00526 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
UPK2O00526 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 PPT1-213ENST00000641319 2388 ntBASIC11.55□□□□□ -0.56
UPK2O00526 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
UPK2O00526 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 MEX3B-202ENST00000558133 4333 ntBASIC11.54□□□□□ -0.56
UPK2O00526 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.54□□□□□ -0.56
UPK2O00526 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
UPK2O00526 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
UPK2O00526 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 KRT18P15-201ENST00000458108 1291 ntBASIC11.54□□□□□ -0.56
UPK2O00526 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK2O00526 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK2O00526 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK2O00526 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK2O00526 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms